MARK Program Help File Contents
- Getting Started
- Program MARK Overview
- Design Matrix
- Design Matrix
- Design Matrix Default
- Design Matrix Basics
- Design Matrix Functions
- Design Matrix Advanced
- Design Matrix Advanced 2
- Design Matrix Cell Size
- Design Matrix Colors
- Individual Covariates
- Individual Covariates — Missing Values
- Individual Covariate Plot
- Individual Covariates and Real Estimates
- Label Columns
- Pre-Defined Models
- Reorder Columns
- Retrieve Columns
- Scaling Covariates
- Standardize Individual Covariates
- Design Matrix Commands
- Design Matrix Commands
- Add Column
- Clipboard, Paste
- Continuous
- Continuous Group Effect
- Continuous Occasion Effect
- Copy Multiple Columns
- Copy One Column
- Copy Value
- Delete One Column
- Delete Multiple Columns
- Discrete Group Effect
- Discrete Occasion Effect
- Identity
- Intercept
- Insert One Column
- Insert Multiple Columns
- Label Columns
- Multiply Columns
- Partial Continuous
- Partial Continuous Group Effect
- Partial Continuous Occasion Effect
- Partial Discrete Group Effect
- Partial Discrete Occasion Effect
- Partial Identity
- Partial Intercept
- Paste Clipboard
- Product of Columns
- Retrieve Column from another Design Matrix
- Rotate Column
- Save Design Matrix
- Zero Columns
- Zero Partial Column
- Graphics
- New Data Initialization
- Initial Values
- Clear Time Intervals
- Covariate Names
- Data Type
- Model Structure
- Change Data Type
- Data Type Change
- Barker Model
- Robust Design Barker Model
- Closed Captures Models
- Density Estimation
- Heterogeneity Closed Captures
- Heterogeneity Open Models
- Individual Heterogeneity Models
- Known Fate
- Link-Barker
- Mark-Resight Data Types
- Multi-State Models
- Multi-State Models with Live and Dead Encounters
- Closed Robust Design Multi-State Model
- Nest Survival
- Population Rate of Change
- Robust Design Model
- Closed Robust Design Multi-State Model
- Open Robust-Design Multi-State Model
- Robust Design Multi-State Model
- Robust Design Multi-State with State Uncertainty
- Occupancy Estimation
- Occupancy Estimation Multi-scale
- Occupancy Estimation Multiple States Single Season
- Occupancy Estimation Robust Design
- Occupancy Estimation Multiple States Robust Design Conditional Binomial
- Occupancy Estimation Multiple States Robust Design General
- Occupany Royle/Nichols
- Occupancy Royle Counts
- Occupancy Estimation Two Species
- Occupancy Estimation Robust Design 2 Species
- Occupancy Estimation with Correlated Detections
- Occupancy Estimation with Relaxed Closure
- Recruitment Parameters
- POPAN Model
- Young Survival from Marked Adults
- Encounter Histories File
- Encounter Histories Format
- Encounter Occasions
- Group Names
- Default Group Names
- Individual Covariates
- Limits
- Number Devices
- Number Groups
- Number Individual Covariates
- Number States
- Time Intervals
- Number of Mixtures
- RMARK Import
- Parameter Index Matrices (PIM)
- Parameter Matrices
- Age Matrix
- All Different Matrix
- Column Modification
- Constant Matrix
- Copy Matrix
- Copy PIM to Clipboard
- Diagonal Modification
- Exchange Matrices
- Open PIM
- Parameter Entry Box
- Paste Clipboard into PIM
- Pre-Defined Models
- PIM Chart
- PIM Decrement
- PIM Increment
- Renumber No Overlap
- Renumber Overlap
- Row Modification
- State Labels
- State Names
- Time Matrix
- Time and Age Matrix
- Known Problems
- Results Browser Commands
- Results Browser
- Adjust Number Parameters
- AICc
- AICc Weight
- ANODEV
- Append Model
- Append DBF
- Beta Parameters
- Beta VC Matrix
- BIC
- Bootstrap Data
- Bootstrap Goodness-of-fit Procedure
- Change Model Name
- Chi-Square Probability
- CHat
- Clear All Models
- Copy Estimates Clipboard
- Data Cloning
- Data Type Change
- Delete Model
- Delta QAICc
- Derived Parameters
- Derived VC Matrix
- Deviance
- Estimation Window
- F Statistic
- File Notes
- Fletcher chat
- Individual Covariate Plot
- Input Data Summary
- Likelihood Ratio (LR) Tests
- Median chat
- Model Averaging
- Model Likelihood
- Model Notes
- Number Parameters
- Parameter Labels
- Parameter Plots
- Pearson Chi-Squared Statistic
- Profile Likelihood Confidence Intervals
- QAICc
- QAICc Weight
- All Different Matrix
- ReGenerate Real Derived Model(s)
- Replace Data
- ReRun Model(s)
- Residuals Plot
- Retrieve Current Model
- Retrieve Model from File
- Results File
- Run Models
- Save Model Structure
- Set Preferences
- Subset Models
- Time Stamp
- Undelete Model
- Variance Components
- Variance Components
- Run Window
- Run Window
- File Models
- Fix Parameters
- Function Evaluations
- Individual Covariates and Real Estimates
- Identifiable Parameters
- Initial Estimates
- Link Functions
- List Data
- MCMC
- Model Name
- Multiple Models
- Number Parameters
- Optimization Method
- Penalty on Likelihood Function
- Profile Likelihood Confidence Intervals
- Real Parameters
- Real VC Matrix
- Run Current Model
- Run File Models
- Run Multiple Models
- Run Title
- Save Model Structure
- Set Number Parameters
- Significant Digits
- Standardize Individual Covariates
- Variance Estimation
- Simulation Capabilities
- Bootstrap Data
- Bootstrap Goodness-of-fit Procedure
- CAPTURE Simulations
- RELEASE Simulations
- Simulation
- Simulation Beta Values True Model
- Simulation Estimation Model Specification
- Simulation Individual Covariates
- Simulation Model Specification
- Simulation Required Tasks
- Simulation of Overdispersion
- Simulation Release Numbers
- Simulation Required Tasks
- Simulation True Model Specification
- Simulation of Robust Design Models
- Miscellaneous
- Window Manipulation